#(POIS)pos flag for_QS for_PS rev_QS rev_PS double_QS double_PS coverage minor_allele_fre major_allele major_allele_count minor_allele minor_allele_count major_allele_count_strand(distinct) minor_allele_count_strand(distinct) minor_allele_fre_for minor_allele_fre_rev all_other_alleles all_other_allele_count 1 L 14.5 100 14.5 100 17 0.059 G 16 T 1 FC:1:(16-0)(1-0) SC:1:(1-0)(1-0) 0.059 0 T 0 4 5 L 8.0 100 0.0 0 4.0 99 88 0.011 A 87 C 1 FC:2:(86-1)(5-1) SC:1:(1-0)(1-0) 0.011 0.000 C 0 4 8 L 0.0 0 14.2 100 6.5 1 118 0.008 G 117 A 1 FC:1:(117-0)(8-0) SC:1:(0-1)(0-1) 0.000 1.000 A 0 4 11 L 0.0 0 3.3 99 1.8 45 267 0.004 C 266 T 1 FC:2:(146-120)(11-11) SC:1:(0-1)(0-1) 0.000 0.008 T 0 4 15 L 0.0 0 2.6 99 1.1 46 397 0.003 C 396 T 1 FC:2:(213-183)(15-17) SC:1:(0-1)(0-1) 0.000 0.005 T 0 4 20 L 0.0 0 2.6 64 1.0 26 421 0.002 T 420 C 1 FC:2:(247-173)(20-19) SC:1:(0-1)(0-1) 0.000 0.006 C 0 4 30 L 0.0 0 1.5 73 0.2 31 617 0.002 T 616 C 1 FC:2:(358-258)(30-27) SC:1:(0-1)(0-1) 0.000 0.004 C 0 33 L 1.5 50 0.0 0 0.0 23 904 0.001 C 903 T 1 FC:2:(407-496)(33-35) SC:1:(1-0)(1-0) 0.002 0.000 T 0 34 L 0.0 0 1.2 84 0.0 34 729 0.001 G 728 A 1 FC:2:(433-295)(34-30) SC:1:(0-1)(0-1) 0.000 0.003 A 0 35 L 1.0 52 6.9 1 4.6 27 787 0.003 G 785 A 2 FC:2:(405-380)(35-32) SC:2:(1-1)(1-1) 0.002 0.003 A 0 36 L 1.2 52 0.8 76 1.0 64 825 0.002 G 823 A 2 FC:2:(401-422)(36-33) SC:2:(1-1)(1-1) 0.002 0.002 A 0 37 L 0.0 0 2.4 10 0.6 4 802 0.001 A 801 G 1 FC:2:(473-328)(37-28) SC:1:(0-1)(0-1) 0.000 0.003 G 0 39 L 0.0 0 0.6 65 0.0 35 938 0.001 C 937 A 1 FC:2:(435-502)(39-39) SC:1:(0-1)(0-1) 0.000 0.002 A 0 40 L 0.0 0 3.3 82 1.1 40 914 0.002 T 911 C 2 FC:2:(471-440)(40-39) SC:1:(0-2)(0-2) 0.000 0.005 CA 1 42 L 0.7 45 0.6 65 0.7 55 957 0.002 T 954 C 2 FC:2:(474-480)(42-37) SC:2:(1-1)(1-1) 0.002 0.002 CA 1 43 L 0.6 47 0.0 0 0.0 26 929 0.001 C 928 I 1 FC:2:(505-423)(43-42) SC:1:(1-0)(1-0) 0.002 0.000 I 0 44 L 0.6 43 0.0 0 0.0 20 1092 0.001 C 1091 T 1 FC:2:(517-574)(44-44) SC:1:(1-0)(1-0) 0.002 0.000 T 0 48 L 0.5 40 0.0 0 0.0 19 1161 0.001 C 1160 T 1 FC:2:(563-597)(48-49) SC:1:(1-0)(1-0) 0.002 0.000 T 0 52 L 0.0 0 0.2 49 0.0 24 1235 0.001 T 1233 C 1 FC:2:(631-602)(52-51) SC:1:(0-1)(0-1) 0.000 0.002 CG 1 53 L 0.3 31 0.5 39 0.4 35 1174 0.002 G 1171 T 2 FC:2:(654-517)(53-47) SC:2:(1-1)(1-1) 0.002 0.002 TD 1 54 L 0.4 30 1.8 93 1.2 60 1220 0.002 G 1215 A 3 FC:2:(639-576)(54-48) SC:2:(1-2)(1-2) 0.002 0.003 AC 2 55 L 0.4 36 0.0 0 0.0 17 1160 0.001 T 1159 C 1 FC:2:(533-626)(55-54) SC:1:(1-0)(1-0) 0.002 0.000 C 0 58 L 0.0 0 0.0 0 0.0 0 1347 0.001 T 1345 A 1 FC:2:(651-694)(58-57) SC:1:(1-0)(1-0) 0.002 0.000 AG 1 59 L 0.2 35 0.0 0 0.0 17 1335 0.001 T 1334 C 1 FC:2:(650-684)(59-59) SC:1:(1-0)(1-0) 0.002 0.000 C 0 62 L 0.0 0 0.7 17 0.0 8 1309 0.001 G 1307 A 1 FC:2:(692-615)(62-56) SC:1:(0-1)(0-1) 0.000 0.002 AT 1 63 L 0.3 34 0.0 0 0.0 17 1225 0.001 T 1224 C 1 FC:2:(598-626)(62-58) SC:1:(1-0)(1-0) 0.002 0.000 C 0 64 L 0.2 37 0.0 0 0.0 16 1364 0.001 C 1362 A 1 FC:2:(594-768)(63-63) SC:1:(1-0)(1-0) 0.002 0.000 AT 1 65 L 0.2 34 0.0 22 0.1 28 1291 0.002 T 1288 G 2 FC:2:(657-631)(65-57) SC:2:(1-1)(1-1) 0.002 0.002 GC 1 66 L 0.0 0 0.0 43 0.0 21 1443 0.001 G 1441 A 1 FC:2:(723-718)(66-62) SC:1:(0-1)(0-1) 0.000 0.001 AD 1 69 L 0.0 0 0.0 26 0.0 14 1443 0.001 G 1442 A 1 FC:2:(642-800)(68-66) SC:1:(0-1)(0-1) 0.000 0.001 A 0 70 L 0.0 0 1.4 59 0.0 33 1425 0.001 G 1422 A 2 FC:2:(625-797)(70-68) SC:1:(0-2)(0-2) 0.000 0.003 AC 1 72 L 0.0 0 0.0 24 0.0 15 1302 0.001 T 1301 C 1 FC:2:(510-791)(69-68) SC:1:(0-1)(0-1) 0.000 0.001 C 0 73 L 60.0 100 51.2 100 55.6 100 1414 0.431 A 804 G 609 FC:2:(404-400)(71-61) SC:2:(312-297)(69-60) 0.435 0.426 GD 1 75 L 0.0 27 0.0 0 0.0 14 1376 0.001 G 1375 A 1 FC:2:(736-639)(74-64) SC:1:(1-0)(1-0) 0.001 0.000 A 0 76 L 0.0 0 0.0 28 0.0 18 1482 0.001 C 1481 A 1 FC:2:(543-938)(69-73) SC:1:(0-1)(0-1) 0.000 0.001 A 0 77 L 0.0 0 0.2 51 0.0 24 1241 0.001 A 1240 G 1 FC:2:(653-587)(74-59) SC:1:(0-1)(0-1) 0.000 0.002 G 0 78 L 0.0 0 1.0 39 0.0 24 1378 0.001 C 1376 T 2 FC:2:(518-858)(66-72) SC:1:(0-2)(0-2) 0.000 0.002 T 0 79 L 0.0 37 0.1 44 0.1 40 1365 0.001 G 1362 T 2 FC:2:(716-646)(76-66) SC:2:(1-1)(1-1) 0.001 0.002 TA 1 80 L 0.6 29 1.3 62 1.0 49 1382 0.002 C 1379 T 3 FC:2:(523-856)(66-71) SC:2:(1-2)(1-2) 0.002 0.002 T 0 81 L 0.3 22 0.0 0 0.0 11 1345 0.001 G 1344 A 1 FC:2:(670-674)(76-66) SC:1:(1-0)(1-0) 0.001 0.000 A 0 82 L 0.3 37 0.1 29 0.2 33 1275 0.002 A 1273 G 2 FC:2:(606-667)(74-66) SC:2:(1-1)(1-1) 0.002 0.001 G 0 83 L 0.5 35 0.0 0 0.0 13 1403 0.001 T 1402 A 1 FC:2:(524-878)(68-68) SC:1:(1-0)(1-0) 0.002 0.000 A 0 84 L 0.0 0 0.0 46 0.0 24 1280 0.001 A 1278 T 1 FC:2:(606-672)(72-63) SC:1:(0-1)(0-1) 0.000 0.001 TG 1 85 L 0.4 22 0.2 46 0.3 33 1260 0.002 G 1257 T 2 FC:2:(655-602)(75-63) SC:2:(1-1)(1-1) 0.002 0.002 TA 1 88 L 0.4 27 0.0 0 0.0 11 1459 0.001 T 1458 D 1 FC:2:(607-851)(73-72) SC:1:(1-0)(1-0) 0.002 0.000 D 0 89 L 2.6 48 0.0 0 0.5 20 1241 0.002 T 1238 G 2 FC:2:(522-716)(69-63) SC:1:(2-0)(2-0) 0.004 0.000 GA 1 90 L 0.0 0 0.5 27 0.0 13 1257 0.001 G 1256 C 1 FC:2:(671-585)(76-62) SC:1:(0-1)(0-1) 0.000 0.002 C 0 91 L 0.0 0 0.0 31 0.0 19 1246 0.001 C 1244 A 1 FC:2:(490-754)(68-72) SC:1:(0-1)(0-1) 0.000 0.001 AT 1 93 L 0.3 37 0.0 0 0.0 19 1163 0.001 A 1162 G 1 FC:2:(596-566)(73-60) SC:1:(1-0)(1-0) 0.002 0.000 G 0 94 L 0.1 32 5.0 100 2.6 66 1259 0.004 G 1254 A 5 FC:2:(636-618)(74-60) SC:2:(1-4)(1-4) 0.002 0.006 A 0 96 L 0.9 24 0.0 0 0.0 9 1224 0.001 C 1223 T 1 FC:2:(475-748)(67-72) SC:1:(1-0)(1-0) 0.002 0.000 T 0 97 L 2.1 53 0.1 42 1.1 48 1241 0.002 G 1237 T 3 FC:2:(632-605)(76-63) SC:2:(2-1)(2-1) 0.003 0.002 TA 1 98 L 0.0 0 0.2 32 0.0 19 1084 0.001 C 1082 A 1 FC:2:(443-639)(64-73) SC:1:(0-1)(0-1) 0.000 0.002 AT 1 100 L 0.3 25 0.0 0 0.0 12 1345 0.001 G 1344 D 1 FC:2:(646-698)(76-68) SC:1:(1-0)(1-0) 0.002 0.000 D 0 101 L 0.0 0 0.1 40 0.0 22 1224 0.001 G 1222 T 1 FC:2:(559-663)(74-68) SC:1:(0-1)(0-1) 0.000 0.002 TC 1 102 L 0.8 30 0.1 40 0.4 36 1037 0.002 A 1035 G 2 FC:2:(457-578)(69-63) SC:2:(1-1)(1-1) 0.002 0.002 G 0 103 L 0.0 0 0.8 18 0.0 10 1093 0.001 G 1092 C 1 FC:2:(514-578)(71-63) SC:1:(0-1)(0-1) 0.000 0.002 C 0 105 L 0.9 29 0.0 0 0.0 11 1141 0.001 C 1140 A 1 FC:2:(447-693)(66-71) SC:1:(1-0)(1-0) 0.002 0.000 A 0 107 L 0.0 0 0.2 45 0.0 25 1154 0.001 G 1153 C 1 FC:2:(521-632)(69-67) SC:1:(0-1)(0-1) 0.000 0.002 C 0 108 L 0.6 23 0.3 14 0.4 18 926 0.002 A 924 G 2 FC:2:(377-547)(60-65) SC:2:(1-1)(1-1) 0.003 0.002 G 0 109 L 0.0 0 0.4 41 0.0 22 1011 0.001 G 1009 A 1 FC:2:(474-535)(66-63) SC:1:(0-1)(0-1) 0.000 0.002 AC 1 110 L 0.0 0 1.8 55 0.5 38 1075 0.002 C 1073 T 2 FC:2:(334-739)(57-66) SC:1:(0-2)(0-2) 0.000 0.003 T 0 111 L 0.8 42 0.0 0 0.0 19 866 0.001 A 865 G 1 FC:2:(395-470)(60-64) SC:1:(1-0)(1-0) 0.003 0.000 G 0 113 L 1.2 28 0.4 21 0.8 24 1019 0.002 C 1017 T 2 FC:2:(390-627)(58-63) SC:2:(1-1)(1-1) 0.003 0.002 T 0 115 L 4.5 35 0.0 0 1.5 11 1031 0.002 T 1029 C 2 FC:2:(322-707)(51-61) SC:1:(2-0)(2-0) 0.006 0.000 C 0 118 L 0.0 0 0.4 30 0.0 18 1010 0.001 G 1009 T 1 FC:2:(419-590)(58-58) SC:1:(0-1)(0-1) 0.000 0.002 T 0 119 L 0.6 32 0.0 0 0.0 8 871 0.001 T 869 C 1 FC:2:(225-644)(38-57) SC:1:(1-0)(1-0) 0.004 0.000 CG 1 120 L 0.0 0 0.5 25 0.0 18 872 0.001 C 871 T 1 FC:2:(250-621)(42-56) SC:1:(0-1)(0-1) 0.000 0.002 T 0 123 L 0.0 0 0.9 24 0.1 16 826 0.001 A 825 G 1 FC:2:(272-553)(43-53) SC:1:(0-1)(0-1) 0.000 0.002 G 0 124 L 0.0 0 1.1 20 0.1 12 823 0.001 G 822 T 1 FC:2:(318-504)(48-52) SC:1:(0-1)(0-1) 0.000 0.002 T 0 125 L 4.1 3 0.0 0 1.2 1 746 0.001 T 745 G 1 FC:2:(174-571)(38-51) SC:1:(1-0)(1-0) 0.006 0.000 G 0 127 L 0.0 0 0.5 53 0.0 37 749 0.001 T 748 C 1 FC:2:(220-528)(38-49) SC:1:(0-1)(0-1) 0.000 0.002 C 0 128 L 0.0 0 0.5 55 0.0 41 702 0.001 C 700 A 1 FC:2:(181-519)(35-48) SC:1:(0-1)(0-1) 0.000 0.002 AG 1 129 L 1.5 54 0.0 0 0.0 16 738 0.001 T 737 A 1 FC:2:(221-516)(37-47) SC:1:(1-0)(1-0) 0.005 0.000 A 0 130 L 0.0 0 3.3 70 1.2 41 725 0.003 G 723 T 2 FC:2:(298-425)(44-46) SC:1:(0-2)(0-2) 0.000 0.005 T 0 131 L 0.0 44 0.0 0 0.0 9 542 0.002 T 541 G 1 FC:2:(113-428)(27-45) SC:1:(1-0)(1-0) 0.009 0.000 G 0 132 L 6.4 99 0.0 0 2.5 18 564 0.004 C 562 T 2 FC:2:(100-462)(23-44) SC:1:(2-0)(2-0) 0.020 0.000 T 0 133 L 5.3 88 3.2 87 4.2 87 639 0.006 T 635 C 4 FC:2:(187-448)(36-43) SC:2:(2-2)(2-2) 0.011 0.004 C 0 137 L 2.2 74 0.0 0 0.7 22 455 0.002 A 454 G 1 FC:2:(132-322)(30-39) SC:1:(1-0)(1-0) 0.008 0.000 G 0 143 L 3.6 82 0.0 0 1.2 24 404 0.002 G 403 T 1 FC:2:(118-285)(27-33) SC:1:(1-0)(1-0) 0.008 0.000 T 0 144 L 0.0 0 2.5 52 0.9 37 384 0.003 C 383 T 1 FC:2:(111-272)(22-32) SC:1:(0-1)(0-1) 0.000 0.004 T 0 146 L 0.0 0 0.1 52 0.0 41 327 0.006 T 325 C 2 FC:2:(67-258)(16-30) SC:1:(0-2)(0-2) 0.000 0.008 C 0 150 L 0.0 0 8.8 62 4.0 46 310 0.010 C 307 T 3 FC:2:(79-228)(16-26) SC:1:(0-3)(0-3) 0.000 0.013 T 0 152 L 1.9 75 8.1 68 5.0 70 273 0.018 T 268 C 5 FC:2:(59-209)(15-24) SC:2:(1-4)(1-4) 0.017 0.019 C 0 153 L 0.0 0 2.6 72 0.9 55 277 0.004 A 276 G 1 FC:2:(65-211)(15-23) SC:1:(0-1)(0-1) 0.000 0.005 G 0 154 L 0.0 0 2.6 79 1.1 53 300 0.003 T 299 A 1 FC:2:(97-202)(20-22) SC:1:(0-1)(0-1) 0.000 0.005 A 0 162 L 0.0 0 5.5 100 2.6 96 170 0.006 C 169 T 1 FC:2:(6-163)(3-14) SC:1:(0-1)(0-1) 0.000 0.006 T 0 4